Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tmem54Q9D7S1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.83□□□□□ -0.36
Tmem54Q9D7S1 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Tmem54Q9D7S1 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tmem54Q9D7S1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.83□□□□□ -0.36
Tmem54Q9D7S1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tmem54Q9D7S1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tmem54Q9D7S1 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Gm38225-201ENSMUST00000194001 393 ntBASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem54Q9D7S1 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tmem54Q9D7S1 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem54Q9D7S1 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Tmem54Q9D7S1 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tmem54Q9D7S1 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.8□□□□□ -0.36
Tmem54Q9D7S1 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem54Q9D7S1 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem54Q9D7S1 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem54Q9D7S1 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tmem54Q9D7S1 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Tmem54Q9D7S1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.8□□□□□ -0.36
Tmem54Q9D7S1 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem54Q9D7S1 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.8□□□□□ -0.36
Tmem54Q9D7S1 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem54Q9D7S1 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem54Q9D7S1 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem54Q9D7S1 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem54Q9D7S1 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem54Q9D7S1 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.8□□□□□ -0.36
Tmem54Q9D7S1 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.8□□□□□ -0.36
Tmem54Q9D7S1 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms