Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim13Q9CYB0 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Trim13Q9CYB0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim13Q9CYB0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim13Q9CYB0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim13Q9CYB0 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim13Q9CYB0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim13Q9CYB0 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trim13Q9CYB0 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim13Q9CYB0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim13Q9CYB0 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim13Q9CYB0 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim13Q9CYB0 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim13Q9CYB0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim13Q9CYB0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim13Q9CYB0 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.54□□□□□ -0.24
Trim13Q9CYB0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim13Q9CYB0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim13Q9CYB0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim13Q9CYB0 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.54□□□□□ -0.24
Trim13Q9CYB0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim13Q9CYB0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim13Q9CYB0 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim13Q9CYB0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trim13Q9CYB0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim13Q9CYB0 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim13Q9CYB0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim13Q9CYB0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Gm37444-201ENSMUST00000193605 439 ntBASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Gm43767-201ENSMUST00000198933 381 ntBASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim13Q9CYB0 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim13Q9CYB0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Trim13Q9CYB0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim13Q9CYB0 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trim13Q9CYB0 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim13Q9CYB0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim13Q9CYB0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trim13Q9CYB0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim13Q9CYB0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Trim13Q9CYB0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim13Q9CYB0 Ank2-226ENSMUST00000189368 339 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms