Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Ssu72Q9CY97 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ssu72Q9CY97 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Ssu72Q9CY97 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ssu72Q9CY97 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Ssu72Q9CY97 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ssu72Q9CY97 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ssu72Q9CY97 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.52□□□□□ -0.09
Ssu72Q9CY97 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssu72Q9CY97 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.52□□□□□ -0.09
Ssu72Q9CY97 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.52□□□□□ -0.09
Ssu72Q9CY97 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ssu72Q9CY97 Gm44487-201ENSMUST00000205145 325 ntBASIC14.52□□□□□ -0.09
Ssu72Q9CY97 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ssu72Q9CY97 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.52□□□□□ -0.09
Ssu72Q9CY97 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.52□□□□□ -0.09
Ssu72Q9CY97 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssu72Q9CY97 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssu72Q9CY97 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssu72Q9CY97 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ssu72Q9CY97 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssu72Q9CY97 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.52□□□□□ -0.09
Ssu72Q9CY97 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssu72Q9CY97 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssu72Q9CY97 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ssu72Q9CY97 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ssu72Q9CY97 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssu72Q9CY97 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssu72Q9CY97 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssu72Q9CY97 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssu72Q9CY97 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssu72Q9CY97 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssu72Q9CY97 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssu72Q9CY97 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ssu72Q9CY97 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
Ssu72Q9CY97 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Gm11764-201ENSMUST00000120221 623 ntBASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Gm6089-201ENSMUST00000197666 938 ntBASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Gm2451-201ENSMUST00000199447 999 ntBASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Gm10290-201ENSMUST00000200451 999 ntBASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Gm7787-201ENSMUST00000216858 688 ntBASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.51□□□□□ -0.09
Ssu72Q9CY97 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.5□□□□□ -0.09
Ssu72Q9CY97 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssu72Q9CY97 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms