Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc3Q9CW03 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc3Q9CW03 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC17.23■□□□□ 0.35
Smc3Q9CW03 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc3Q9CW03 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Smc3Q9CW03 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc3Q9CW03 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.23■□□□□ 0.35
Smc3Q9CW03 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smc3Q9CW03 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.23■□□□□ 0.35
Smc3Q9CW03 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Smc3Q9CW03 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc3Q9CW03 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc3Q9CW03 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Smc3Q9CW03 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc3Q9CW03 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.22■□□□□ 0.35
Smc3Q9CW03 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc3Q9CW03 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc3Q9CW03 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc3Q9CW03 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Smc3Q9CW03 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Smc3Q9CW03 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc3Q9CW03 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.22■□□□□ 0.35
Smc3Q9CW03 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.22■□□□□ 0.35
Smc3Q9CW03 Gm17971-201ENSMUST00000190239 806 ntBASIC17.22■□□□□ 0.35
Smc3Q9CW03 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.22■□□□□ 0.35
Smc3Q9CW03 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc3Q9CW03 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc3Q9CW03 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc3Q9CW03 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Smc3Q9CW03 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.22■□□□□ 0.35
Smc3Q9CW03 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc3Q9CW03 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc3Q9CW03 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc3Q9CW03 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC17.21■□□□□ 0.35
Smc3Q9CW03 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc3Q9CW03 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc3Q9CW03 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc3Q9CW03 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc3Q9CW03 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc3Q9CW03 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc3Q9CW03 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc3Q9CW03 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smc3Q9CW03 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc3Q9CW03 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smc3Q9CW03 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.21■□□□□ 0.35
Smc3Q9CW03 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.21■□□□□ 0.35
Smc3Q9CW03 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc3Q9CW03 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smc3Q9CW03 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
Smc3Q9CW03 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc3Q9CW03 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smc3Q9CW03 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Smc3Q9CW03 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc3Q9CW03 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Smc3Q9CW03 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc3Q9CW03 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc3Q9CW03 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc3Q9CW03 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc3Q9CW03 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Smc3Q9CW03 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.21■□□□□ 0.34
Smc3Q9CW03 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
Smc3Q9CW03 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc3Q9CW03 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc3Q9CW03 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.2■□□□□ 0.34
Smc3Q9CW03 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smc3Q9CW03 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smc3Q9CW03 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc3Q9CW03 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc3Q9CW03 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smc3Q9CW03 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc3Q9CW03 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc3Q9CW03 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc3Q9CW03 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc3Q9CW03 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc3Q9CW03 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smc3Q9CW03 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.2■□□□□ 0.34
Smc3Q9CW03 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.2■□□□□ 0.34
Smc3Q9CW03 Gm13036-201ENSMUST00000117799 748 ntBASIC17.2■□□□□ 0.34
Smc3Q9CW03 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc3Q9CW03 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc3Q9CW03 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc3Q9CW03 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smc3Q9CW03 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smc3Q9CW03 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smc3Q9CW03 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc3Q9CW03 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.2■□□□□ 0.34
Smc3Q9CW03 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.2■□□□□ 0.34
Smc3Q9CW03 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc3Q9CW03 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc3Q9CW03 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc3Q9CW03 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smc3Q9CW03 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smc3Q9CW03 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smc3Q9CW03 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc3Q9CW03 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc3Q9CW03 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smc3Q9CW03 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc3Q9CW03 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.19■□□□□ 0.34
Smc3Q9CW03 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Smc3Q9CW03 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms