Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Chchd1Q9CQA6 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chchd1Q9CQA6 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Gm12896-201ENSMUST00000118430 226 ntBASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Gm44878-201ENSMUST00000205812 1295 ntBASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chchd1Q9CQA6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chchd1Q9CQA6 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chchd1Q9CQA6 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chchd1Q9CQA6 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chchd1Q9CQA6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chchd1Q9CQA6 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.02□□□□□ -0.64
Chchd1Q9CQA6 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chchd1Q9CQA6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chchd1Q9CQA6 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chchd1Q9CQA6 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chchd1Q9CQA6 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chchd1Q9CQA6 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chchd1Q9CQA6 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chchd1Q9CQA6 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chchd1Q9CQA6 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chchd1Q9CQA6 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chchd1Q9CQA6 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Chchd1Q9CQA6 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chchd1Q9CQA6 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms