Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb1Q9CQ70 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb1Q9CQ70 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb1Q9CQ70 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC11.99□□□□□ -0.49
H2afb1Q9CQ70 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb1Q9CQ70 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.99□□□□□ -0.49
H2afb1Q9CQ70 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.99□□□□□ -0.49
H2afb1Q9CQ70 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb1Q9CQ70 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb1Q9CQ70 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb1Q9CQ70 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb1Q9CQ70 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb1Q9CQ70 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb1Q9CQ70 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
H2afb1Q9CQ70 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Mir5131-201ENSMUST00000175426 93 ntBASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afb1Q9CQ70 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms