Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Olfr129-201ENSMUST00000122318 993 ntBASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Gm33142-201ENSMUST00000193913 867 ntBASIC13.22□□□□□ -0.29
Krt88Q9CPR6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Gm10819-201ENSMUST00000099988 561 ntBASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Krt88Q9CPR6 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt88Q9CPR6 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt88Q9CPR6 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt88Q9CPR6 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt88Q9CPR6 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Krt88Q9CPR6 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt88Q9CPR6 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt88Q9CPR6 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt88Q9CPR6 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt88Q9CPR6 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt88Q9CPR6 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt88Q9CPR6 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt88Q9CPR6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Krt88Q9CPR6 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.21□□□□□ -0.29
Krt88Q9CPR6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Krt88Q9CPR6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Krt88Q9CPR6 Gm27742-201ENSMUST00000184667 60 ntBASIC13.21□□□□□ -0.29
Krt88Q9CPR6 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.21□□□□□ -0.29
Krt88Q9CPR6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Krt88Q9CPR6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Krt88Q9CPR6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Krt88Q9CPR6 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.21□□□□□ -0.29
Krt88Q9CPR6 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Krt88Q9CPR6 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Krt88Q9CPR6 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Krt88Q9CPR6 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Krt88Q9CPR6 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Krt88Q9CPR6 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Krt88Q9CPR6 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Krt88Q9CPR6 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Krt88Q9CPR6 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.21□□□□□ -0.3
Krt88Q9CPR6 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt88Q9CPR6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms