Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim34aQ99PP6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim34aQ99PP6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim34aQ99PP6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim34aQ99PP6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Trim34aQ99PP6 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim34aQ99PP6 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim34aQ99PP6 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim34aQ99PP6 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim34aQ99PP6 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim34aQ99PP6 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Trim34aQ99PP6 Ighv5-13-201ENSMUST00000193550 290 ntBASIC17.97■□□□□ 0.47
Trim34aQ99PP6 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim34aQ99PP6 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17.97■□□□□ 0.47
Trim34aQ99PP6 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC17.97■□□□□ 0.47
Trim34aQ99PP6 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim34aQ99PP6 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim34aQ99PP6 Gm6180-201ENSMUST00000065243 498 ntBASIC17.97■□□□□ 0.47
Trim34aQ99PP6 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim34aQ99PP6 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Trim34aQ99PP6 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim34aQ99PP6 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.97■□□□□ 0.47
Trim34aQ99PP6 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim34aQ99PP6 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim34aQ99PP6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Gm14127-201ENSMUST00000117906 678 ntBASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Gm18018-201ENSMUST00000198273 408 ntBASIC17.96■□□□□ 0.47
Trim34aQ99PP6 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trim34aQ99PP6 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim34aQ99PP6 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trim34aQ99PP6 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
Trim34aQ99PP6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Trim34aQ99PP6 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim34aQ99PP6 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim34aQ99PP6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim34aQ99PP6 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim34aQ99PP6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.95■□□□□ 0.46
Trim34aQ99PP6 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim34aQ99PP6 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim34aQ99PP6 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim34aQ99PP6 BC001981-202ENSMUST00000191393 1545 ntBASIC17.95■□□□□ 0.46
Trim34aQ99PP6 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim34aQ99PP6 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Trim34aQ99PP6 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim34aQ99PP6 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC17.95■□□□□ 0.46
Trim34aQ99PP6 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim34aQ99PP6 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.95■□□□□ 0.46
Trim34aQ99PP6 Gm6916-202ENSMUST00000205523 195 ntBASIC17.95■□□□□ 0.46
Trim34aQ99PP6 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim34aQ99PP6 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim34aQ99PP6 Gm9797-201ENSMUST00000052902 613 ntBASIC17.95■□□□□ 0.46
Trim34aQ99PP6 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim34aQ99PP6 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim34aQ99PP6 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim34aQ99PP6 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms