Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Msh4Q99MT2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Msh4Q99MT2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Msh4Q99MT2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.27□□□□□ -0.13
Msh4Q99MT2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Msh4Q99MT2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Msh4Q99MT2 Gm43575-201ENSMUST00000196420 516 ntBASIC14.27□□□□□ -0.13
Msh4Q99MT2 Thap2-203ENSMUST00000218989 527 ntBASIC14.27□□□□□ -0.13
Msh4Q99MT2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Msh4Q99MT2 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.27□□□□□ -0.13
Msh4Q99MT2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Msh4Q99MT2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Msh4Q99MT2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Msh4Q99MT2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.27□□□□□ -0.13
Msh4Q99MT2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Msh4Q99MT2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Msh4Q99MT2 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Msh4Q99MT2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Msh4Q99MT2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Msh4Q99MT2 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.26□□□□□ -0.13
Msh4Q99MT2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msh4Q99MT2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.26□□□□□ -0.13
Msh4Q99MT2 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.26□□□□□ -0.13
Msh4Q99MT2 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.26□□□□□ -0.13
Msh4Q99MT2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.26□□□□□ -0.13
Msh4Q99MT2 Celf4-206ENSMUST00000224553 1729 ntBASIC14.26□□□□□ -0.13
Msh4Q99MT2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msh4Q99MT2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Msh4Q99MT2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Gm27301-201ENSMUST00000184012 127 ntBASIC14.25□□□□□ -0.13
Msh4Q99MT2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.25□□□□□ -0.13
Msh4Q99MT2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.25□□□□□ -0.13
Msh4Q99MT2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Msh4Q99MT2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Msh4Q99MT2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms