Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Gm27920-201ENSMUST00000183953 96 ntBASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Gm3961-201ENSMUST00000204425 994 ntBASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col25a1Q99MQ5 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 AA619741-201ENSMUST00000195095 646 ntBASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 Gm43138-201ENSMUST00000199123 708 ntBASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col25a1Q99MQ5 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Col25a1Q99MQ5 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
Col25a1Q99MQ5 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms