Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf111Q99ML9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf111Q99ML9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf111Q99ML9 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf111Q99ML9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.21□□□□□ -0.13
Rnf111Q99ML9 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Rnf111Q99ML9 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf111Q99ML9 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf111Q99ML9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf111Q99ML9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf111Q99ML9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rnf111Q99ML9 Gm27628-201ENSMUST00000184911 107 ntBASIC14.21□□□□□ -0.13
Rnf111Q99ML9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.21□□□□□ -0.13
Rnf111Q99ML9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf111Q99ML9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rnf111Q99ML9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf111Q99ML9 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.21□□□□□ -0.13
Rnf111Q99ML9 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rnf111Q99ML9 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.21□□□□□ -0.13
Rnf111Q99ML9 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf111Q99ML9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf111Q99ML9 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf111Q99ML9 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf111Q99ML9 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Rnf111Q99ML9 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf111Q99ML9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf111Q99ML9 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf111Q99ML9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf111Q99ML9 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf111Q99ML9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf111Q99ML9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms