Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Gm9103-201ENSMUST00000119371 405 ntBASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Gm27459-201ENSMUST00000184860 107 ntBASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Gm34391-201ENSMUST00000203706 907 ntBASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Nkd1Q99MH6 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Rps4l-201ENSMUST00000071745 943 ntBASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkd1Q99MH6 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 Gm24589-201ENSMUST00000116692 94 ntBASIC13.81□□□□□ -0.2
Nkd1Q99MH6 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.81□□□□□ -0.2
Nkd1Q99MH6 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkd1Q99MH6 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.8□□□□□ -0.2
Nkd1Q99MH6 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms