Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Gm4984-201ENSMUST00000115987 360 ntBASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Gm9002-201ENSMUST00000178437 499 ntBASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Gm27892-201ENSMUST00000185017 106 ntBASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Gm45453-201ENSMUST00000211758 853 ntBASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nkx6-1Q99MA9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 Celf4-206ENSMUST00000224553 1729 ntBASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 AC153937.1-201ENSMUST00000218734 412 ntBASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx6-1Q99MA9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Gm5035-201ENSMUST00000215581 927 ntBASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Gm19220-201ENSMUST00000222682 803 ntBASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx6-1Q99MA9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms