Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.16□□□□□ -0.14
Cstf3Q99LI7 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cstf3Q99LI7 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf3Q99LI7 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf3Q99LI7 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cstf3Q99LI7 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cstf3Q99LI7 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Gm2272-201ENSMUST00000194903 582 ntBASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cstf3Q99LI7 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Cstf3Q99LI7 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cstf3Q99LI7 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.13□□□□□ -0.15
Cstf3Q99LI7 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cstf3Q99LI7 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Cstf3Q99LI7 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms