Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RtcbQ99LF4 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RtcbQ99LF4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RtcbQ99LF4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RtcbQ99LF4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RtcbQ99LF4 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RtcbQ99LF4 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC17.95■□□□□ 0.46
RtcbQ99LF4 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RtcbQ99LF4 Gm27839-201ENSMUST00000184242 106 ntBASIC17.95■□□□□ 0.46
RtcbQ99LF4 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RtcbQ99LF4 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RtcbQ99LF4 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RtcbQ99LF4 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC17.95■□□□□ 0.46
RtcbQ99LF4 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RtcbQ99LF4 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
RtcbQ99LF4 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RtcbQ99LF4 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RtcbQ99LF4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RtcbQ99LF4 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RtcbQ99LF4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
RtcbQ99LF4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RtcbQ99LF4 Gm9200-201ENSMUST00000118513 1354 ntBASIC17.94■□□□□ 0.46
RtcbQ99LF4 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RtcbQ99LF4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RtcbQ99LF4 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RtcbQ99LF4 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RtcbQ99LF4 Mir1894-201ENSMUST00000122802 81 ntBASIC17.94■□□□□ 0.46
RtcbQ99LF4 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RtcbQ99LF4 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC17.94■□□□□ 0.46
RtcbQ99LF4 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RtcbQ99LF4 Gm8835-201ENSMUST00000173096 1169 ntBASIC17.94■□□□□ 0.46
RtcbQ99LF4 Gm21470-201ENSMUST00000187680 696 ntBASIC17.94■□□□□ 0.46
RtcbQ99LF4 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC17.94■□□□□ 0.46
RtcbQ99LF4 Gm17794-201ENSMUST00000220252 955 ntBASIC17.94■□□□□ 0.46
RtcbQ99LF4 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RtcbQ99LF4 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RtcbQ99LF4 AC156560.2-201ENSMUST00000221232 264 ntBASIC17.94■□□□□ 0.46
RtcbQ99LF4 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RtcbQ99LF4 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RtcbQ99LF4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RtcbQ99LF4 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RtcbQ99LF4 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC17.94■□□□□ 0.46
RtcbQ99LF4 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
RtcbQ99LF4 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RtcbQ99LF4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RtcbQ99LF4 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RtcbQ99LF4 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.94■□□□□ 0.46
RtcbQ99LF4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RtcbQ99LF4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RtcbQ99LF4 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RtcbQ99LF4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RtcbQ99LF4 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RtcbQ99LF4 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RtcbQ99LF4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RtcbQ99LF4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RtcbQ99LF4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RtcbQ99LF4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RtcbQ99LF4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RtcbQ99LF4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.93■□□□□ 0.46
RtcbQ99LF4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RtcbQ99LF4 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17.93■□□□□ 0.46
RtcbQ99LF4 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RtcbQ99LF4 Gm17795-201ENSMUST00000214505 757 ntBASIC17.93■□□□□ 0.46
RtcbQ99LF4 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RtcbQ99LF4 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RtcbQ99LF4 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RtcbQ99LF4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.93■□□□□ 0.46
RtcbQ99LF4 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RtcbQ99LF4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RtcbQ99LF4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
RtcbQ99LF4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RtcbQ99LF4 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RtcbQ99LF4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RtcbQ99LF4 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RtcbQ99LF4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RtcbQ99LF4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RtcbQ99LF4 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RtcbQ99LF4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RtcbQ99LF4 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RtcbQ99LF4 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RtcbQ99LF4 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC17.92■□□□□ 0.46
RtcbQ99LF4 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RtcbQ99LF4 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RtcbQ99LF4 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RtcbQ99LF4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RtcbQ99LF4 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RtcbQ99LF4 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RtcbQ99LF4 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
RtcbQ99LF4 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RtcbQ99LF4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RtcbQ99LF4 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RtcbQ99LF4 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RtcbQ99LF4 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RtcbQ99LF4 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RtcbQ99LF4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RtcbQ99LF4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RtcbQ99LF4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RtcbQ99LF4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RtcbQ99LF4 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RtcbQ99LF4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms