Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Vmp1Q99KU0 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vmp1Q99KU0 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vmp1Q99KU0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vmp1Q99KU0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vmp1Q99KU0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vmp1Q99KU0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vmp1Q99KU0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.13□□□□□ -0.15
Vmp1Q99KU0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vmp1Q99KU0 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.13□□□□□ -0.15
Vmp1Q99KU0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Vmp1Q99KU0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vmp1Q99KU0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vmp1Q99KU0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vmp1Q99KU0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Vmp1Q99KU0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vmp1Q99KU0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.13□□□□□ -0.15
Vmp1Q99KU0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vmp1Q99KU0 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Vmp1Q99KU0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.13□□□□□ -0.15
Vmp1Q99KU0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vmp1Q99KU0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Vmp1Q99KU0 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vmp1Q99KU0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Vmp1Q99KU0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Vmp1Q99KU0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vmp1Q99KU0 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vmp1Q99KU0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.11□□□□□ -0.15
Vmp1Q99KU0 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vmp1Q99KU0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vmp1Q99KU0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms