Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Rfc4Q99J62 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc4Q99J62 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc4Q99J62 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.82■□□□□ 0.28
Rfc4Q99J62 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.82■□□□□ 0.28
Rfc4Q99J62 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.82■□□□□ 0.28
Rfc4Q99J62 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc4Q99J62 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc4Q99J62 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rfc4Q99J62 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc4Q99J62 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc4Q99J62 Gm45668-201ENSMUST00000211271 493 ntBASIC16.82■□□□□ 0.28
Rfc4Q99J62 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc4Q99J62 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc4Q99J62 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc4Q99J62 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc4Q99J62 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.82■□□□□ 0.28
Rfc4Q99J62 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc4Q99J62 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc4Q99J62 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc4Q99J62 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc4Q99J62 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Rfc4Q99J62 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.82■□□□□ 0.28
Rfc4Q99J62 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rfc4Q99J62 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc4Q99J62 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rfc4Q99J62 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Rfc4Q99J62 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.81■□□□□ 0.28
Rfc4Q99J62 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rfc4Q99J62 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc4Q99J62 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc4Q99J62 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc4Q99J62 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Rfc4Q99J62 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc4Q99J62 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc4Q99J62 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rfc4Q99J62 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc4Q99J62 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc4Q99J62 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc4Q99J62 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc4Q99J62 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.81■□□□□ 0.28
Rfc4Q99J62 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rfc4Q99J62 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc4Q99J62 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc4Q99J62 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc4Q99J62 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc4Q99J62 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc4Q99J62 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc4Q99J62 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc4Q99J62 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc4Q99J62 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rfc4Q99J62 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc4Q99J62 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc4Q99J62 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.8■□□□□ 0.28
Rfc4Q99J62 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc4Q99J62 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc4Q99J62 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.8■□□□□ 0.28
Rfc4Q99J62 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.8■□□□□ 0.28
Rfc4Q99J62 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.8■□□□□ 0.28
Rfc4Q99J62 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.8■□□□□ 0.28
Rfc4Q99J62 Gm37917-201ENSMUST00000194711 392 ntBASIC16.8■□□□□ 0.28
Rfc4Q99J62 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc4Q99J62 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.8■□□□□ 0.28
Rfc4Q99J62 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.8■□□□□ 0.28
Rfc4Q99J62 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc4Q99J62 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rfc4Q99J62 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc4Q99J62 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc4Q99J62 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc4Q99J62 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc4Q99J62 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rfc4Q99J62 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc4Q99J62 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc4Q99J62 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc4Q99J62 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc4Q99J62 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc4Q99J62 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rfc4Q99J62 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfc4Q99J62 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Rfc4Q99J62 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.79■□□□□ 0.28
Rfc4Q99J62 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC16.79■□□□□ 0.28
Rfc4Q99J62 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms