Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Gm9385-201ENSMUST00000117563 472 ntBASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha3Q91Y16 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Rprl2-201ENSMUST00000157150 290 ntBASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.29■□□□□ 0.04
Pcdha3Q91Y16 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Gm23935-201ENSMUST00000102303 57 ntBASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Gm24270-201ENSMUST00000102326 57 ntBASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Gm24245-201ENSMUST00000157318 57 ntBASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdha3Q91Y16 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pcdha3Q91Y16 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.27■□□□□ 0.04
Pcdha3Q91Y16 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Pcdha3Q91Y16 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha3Q91Y16 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha3Q91Y16 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha3Q91Y16 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.27■□□□□ 0.04
Pcdha3Q91Y16 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha3Q91Y16 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha3Q91Y16 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha3Q91Y16 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha3Q91Y16 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.27■□□□□ 0.04
Pcdha3Q91Y16 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdha3Q91Y16 Gm26308-201ENSMUST00000157768 69 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms