Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 Gm44335-201ENSMUST00000196879 141 ntBASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 Gm44297-201ENSMUST00000198304 141 ntBASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 Gm44346-201ENSMUST00000198851 141 ntBASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Gm25287-201ENSMUST00000103846 110 ntBASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Gm22918-201ENSMUST00000103855 110 ntBASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Gm14042-201ENSMUST00000120139 833 ntBASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Gm12134-201ENSMUST00000122109 520 ntBASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Gm43575-201ENSMUST00000196420 516 ntBASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdha9Q91Y11 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Gm23935-201ENSMUST00000102303 57 ntBASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Gm24270-201ENSMUST00000102326 57 ntBASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Gm24245-201ENSMUST00000157318 57 ntBASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Gm43125-201ENSMUST00000201724 730 ntBASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdha9Q91Y11 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha9Q91Y11 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.52■□□□□ 0.08
Pcdha9Q91Y11 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha9Q91Y11 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdha9Q91Y11 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha9Q91Y11 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha9Q91Y11 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha9Q91Y11 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha9Q91Y11 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Pcdha9Q91Y11 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha9Q91Y11 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha9Q91Y11 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdha9Q91Y11 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.52■□□□□ 0.08
Pcdha9Q91Y11 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms