Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Gm44038-201ENSMUST00000203952 889 ntBASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Gm20553-201ENSMUST00000204205 844 ntBASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 AC168059.2-201ENSMUST00000224473 333 ntBASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Asic1-205ENSMUST00000228185 1818 ntBASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 AC154424.1-201ENSMUST00000225883 799 ntBASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Gm20541-201ENSMUST00000173035 1406 ntBASIC14.32□□□□□ -0.12
Pcdhb20Q91XZ9 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Gm11510-201ENSMUST00000120278 347 ntBASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Gm44582-201ENSMUST00000209125 445 ntBASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Gm42995-201ENSMUST00000197047 1330 ntBASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb20Q91XZ9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms