Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx41Q91VN6 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.8■□□□□ 0.28
Ddx41Q91VN6 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
Ddx41Q91VN6 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Ddx41Q91VN6 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx41Q91VN6 Mir449b-201ENSMUST00000104833 80 ntBASIC16.8■□□□□ 0.28
Ddx41Q91VN6 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx41Q91VN6 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.8■□□□□ 0.28
Ddx41Q91VN6 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx41Q91VN6 Gm16026-204ENSMUST00000162652 683 ntBASIC16.8■□□□□ 0.28
Ddx41Q91VN6 AA543401-201ENSMUST00000164248 1269 ntBASIC16.8■□□□□ 0.28
Ddx41Q91VN6 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx41Q91VN6 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx41Q91VN6 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx41Q91VN6 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Ddx41Q91VN6 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.8■□□□□ 0.28
Ddx41Q91VN6 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx41Q91VN6 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.8■□□□□ 0.28
Ddx41Q91VN6 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx41Q91VN6 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx41Q91VN6 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx41Q91VN6 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm22065-201ENSMUST00000103753 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm22066-201ENSMUST00000103761 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm24932-201ENSMUST00000103763 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm24115-201ENSMUST00000103799 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm22190-201ENSMUST00000103827 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm22191-201ENSMUST00000103831 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm24721-201ENSMUST00000103849 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm28018-201ENSMUST00000103869 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm26399-201ENSMUST00000103937 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm6973-201ENSMUST00000117080 721 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm25349-201ENSMUST00000177728 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm23616-201ENSMUST00000177797 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm25871-201ENSMUST00000177816 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm24752-201ENSMUST00000178240 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm24496-201ENSMUST00000178287 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm25649-201ENSMUST00000178476 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm25548-201ENSMUST00000178681 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm23147-201ENSMUST00000178841 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm26095-201ENSMUST00000179270 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm22171-201ENSMUST00000179283 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm23936-201ENSMUST00000179354 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm22619-201ENSMUST00000179516 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm25255-201ENSMUST00000179579 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm24755-201ENSMUST00000179691 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm26506-201ENSMUST00000179692 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm25086-201ENSMUST00000179931 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm23243-201ENSMUST00000180047 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm24659-201ENSMUST00000180212 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm24169-201ENSMUST00000180244 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm23689-201ENSMUST00000180354 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm27359-201ENSMUST00000184153 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm27785-201ENSMUST00000184268 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm27466-201ENSMUST00000184396 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm27703-201ENSMUST00000184836 110 ntBASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
Ddx41Q91VN6 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms