Protein–RNA interactions for Protein: Q91VH2

Snx9, Sorting nexin-9, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx9Q91VH2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Snx9Q91VH2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.41■□□□□ 0.06
Snx9Q91VH2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Snx9Q91VH2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Snx9Q91VH2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.41■□□□□ 0.06
Snx9Q91VH2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Snx9Q91VH2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Snx9Q91VH2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Gm8749-201ENSMUST00000117737 331 ntBASIC15.4■□□□□ 0.06
Snx9Q91VH2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Gm10253-201ENSMUST00000194270 940 ntBASIC15.4■□□□□ 0.06
Snx9Q91VH2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Snx9Q91VH2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Snx9Q91VH2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Snx9Q91VH2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Snx9Q91VH2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Snx9Q91VH2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Snx9Q91VH2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Snx9Q91VH2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Snx9Q91VH2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Snx9Q91VH2 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.39■□□□□ 0.05
Snx9Q91VH2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Snx9Q91VH2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Snx9Q91VH2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Snx9Q91VH2 Gm13616-201ENSMUST00000120600 222 ntBASIC15.39■□□□□ 0.05
Snx9Q91VH2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Snx9Q91VH2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.39■□□□□ 0.05
Snx9Q91VH2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Snx9Q91VH2 Gm9726-201ENSMUST00000180321 678 ntBASIC15.39■□□□□ 0.05
Snx9Q91VH2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.39■□□□□ 0.05
Snx9Q91VH2 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Snx9Q91VH2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.39■□□□□ 0.05
Snx9Q91VH2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.39■□□□□ 0.05
Snx9Q91VH2 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.39■□□□□ 0.05
Snx9Q91VH2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Snx9Q91VH2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Snx9Q91VH2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Snx9Q91VH2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Snx9Q91VH2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Snx9Q91VH2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Snx9Q91VH2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Snx9Q91VH2 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.39■□□□□ 0.05
Snx9Q91VH2 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Snx9Q91VH2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Snx9Q91VH2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Snx9Q91VH2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Snx9Q91VH2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Snx9Q91VH2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.38■□□□□ 0.05
Snx9Q91VH2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Snx9Q91VH2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Snx9Q91VH2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Snx9Q91VH2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Snx9Q91VH2 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.38■□□□□ 0.05
Snx9Q91VH2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
Snx9Q91VH2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Snx9Q91VH2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.38■□□□□ 0.05
Snx9Q91VH2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Snx9Q91VH2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.38■□□□□ 0.05
Snx9Q91VH2 Gm25948-201ENSMUST00000175334 112 ntBASIC15.38■□□□□ 0.05
Snx9Q91VH2 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.38■□□□□ 0.05
Snx9Q91VH2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.38■□□□□ 0.05
Snx9Q91VH2 Gm2451-201ENSMUST00000199447 999 ntBASIC15.38■□□□□ 0.05
Snx9Q91VH2 Gm10290-201ENSMUST00000200451 999 ntBASIC15.38■□□□□ 0.05
Snx9Q91VH2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.38■□□□□ 0.05
Snx9Q91VH2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.38■□□□□ 0.05
Snx9Q91VH2 Gm45098-201ENSMUST00000207179 657 ntBASIC15.38■□□□□ 0.05
Snx9Q91VH2 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Snx9Q91VH2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Snx9Q91VH2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.38■□□□□ 0.05
Snx9Q91VH2 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Snx9Q91VH2 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Snx9Q91VH2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Snx9Q91VH2 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Snx9Q91VH2 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Snx9Q91VH2 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.38■□□□□ 0.05
Snx9Q91VH2 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms