Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm7029-201ENSMUST00000173226 450 ntBASIC17.08■□□□□ 0.33
StrcQ8VIM6 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC17.08■□□□□ 0.33
StrcQ8VIM6 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.33
StrcQ8VIM6 AC114543.1-201ENSMUST00000226451 1558 ntBASIC17.08■□□□□ 0.32
StrcQ8VIM6 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
StrcQ8VIM6 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
StrcQ8VIM6 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
StrcQ8VIM6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
StrcQ8VIM6 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
StrcQ8VIM6 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC17.08■□□□□ 0.32
StrcQ8VIM6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
StrcQ8VIM6 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
StrcQ8VIM6 Gm29199-201ENSMUST00000187766 775 ntBASIC17.07■□□□□ 0.32
StrcQ8VIM6 Gm38223-201ENSMUST00000194484 695 ntBASIC17.07■□□□□ 0.32
StrcQ8VIM6 Gm45880-201ENSMUST00000213041 853 ntBASIC17.07■□□□□ 0.32
StrcQ8VIM6 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
StrcQ8VIM6 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
StrcQ8VIM6 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC17.07■□□□□ 0.32
StrcQ8VIM6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
StrcQ8VIM6 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
StrcQ8VIM6 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
StrcQ8VIM6 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
StrcQ8VIM6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
StrcQ8VIM6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
StrcQ8VIM6 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
StrcQ8VIM6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
StrcQ8VIM6 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
StrcQ8VIM6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
StrcQ8VIM6 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
StrcQ8VIM6 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC17.07■□□□□ 0.32
StrcQ8VIM6 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
StrcQ8VIM6 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC17.07■□□□□ 0.32
StrcQ8VIM6 Gm5850-201ENSMUST00000192923 1206 ntBASIC17.07■□□□□ 0.32
StrcQ8VIM6 Olfr284-202ENSMUST00000206647 966 ntBASIC17.07■□□□□ 0.32
StrcQ8VIM6 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
StrcQ8VIM6 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
StrcQ8VIM6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
StrcQ8VIM6 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
StrcQ8VIM6 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
StrcQ8VIM6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
StrcQ8VIM6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
StrcQ8VIM6 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
StrcQ8VIM6 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
StrcQ8VIM6 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
StrcQ8VIM6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
StrcQ8VIM6 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
StrcQ8VIM6 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
StrcQ8VIM6 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
StrcQ8VIM6 Gm15808-201ENSMUST00000119046 604 ntBASIC17.06■□□□□ 0.32
StrcQ8VIM6 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC17.06■□□□□ 0.32
StrcQ8VIM6 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
StrcQ8VIM6 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
StrcQ8VIM6 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
StrcQ8VIM6 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
StrcQ8VIM6 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
StrcQ8VIM6 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
StrcQ8VIM6 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
StrcQ8VIM6 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
StrcQ8VIM6 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC17.06■□□□□ 0.32
StrcQ8VIM6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
StrcQ8VIM6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
StrcQ8VIM6 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
StrcQ8VIM6 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
StrcQ8VIM6 Gm6203-201ENSMUST00000209575 1342 ntBASIC17.06■□□□□ 0.32
StrcQ8VIM6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
StrcQ8VIM6 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
StrcQ8VIM6 Gm8706-201ENSMUST00000197372 1491 ntBASIC17.05■□□□□ 0.32
StrcQ8VIM6 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
StrcQ8VIM6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
StrcQ8VIM6 Gm11557-201ENSMUST00000120200 1008 ntBASIC17.05■□□□□ 0.32
StrcQ8VIM6 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
StrcQ8VIM6 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC17.05■□□□□ 0.32
StrcQ8VIM6 Gm8927-201ENSMUST00000181978 981 ntBASIC17.05■□□□□ 0.32
StrcQ8VIM6 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
StrcQ8VIM6 AC073947.2-201ENSMUST00000215888 1130 ntBASIC17.05■□□□□ 0.32
StrcQ8VIM6 Gm9176-201ENSMUST00000219955 1120 ntBASIC17.05■□□□□ 0.32
StrcQ8VIM6 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
StrcQ8VIM6 Gm3222-201ENSMUST00000071282 990 ntBASIC17.05■□□□□ 0.32
StrcQ8VIM6 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
StrcQ8VIM6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
StrcQ8VIM6 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.05■□□□□ 0.32
StrcQ8VIM6 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
StrcQ8VIM6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
StrcQ8VIM6 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC17.05■□□□□ 0.32
StrcQ8VIM6 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
StrcQ8VIM6 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
StrcQ8VIM6 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
StrcQ8VIM6 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
StrcQ8VIM6 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
StrcQ8VIM6 Gm38266-201ENSMUST00000194931 421 ntBASIC17.05■□□□□ 0.32
StrcQ8VIM6 Gm42929-201ENSMUST00000198374 1286 ntBASIC17.05■□□□□ 0.32
StrcQ8VIM6 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC17.05■□□□□ 0.32
StrcQ8VIM6 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC17.05■□□□□ 0.32
StrcQ8VIM6 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC17.05■□□□□ 0.32
StrcQ8VIM6 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
StrcQ8VIM6 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
StrcQ8VIM6 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
StrcQ8VIM6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
StrcQ8VIM6 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
StrcQ8VIM6 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms