Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TraipQ8VIG6 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Syt7-204ENSMUST00000223586 1344 ntBASIC15.54■□□□□ 0.08
TraipQ8VIG6 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.54■□□□□ 0.08
TraipQ8VIG6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Gm43703-201ENSMUST00000200523 763 ntBASIC15.54■□□□□ 0.08
TraipQ8VIG6 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.54■□□□□ 0.08
TraipQ8VIG6 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.54■□□□□ 0.08
TraipQ8VIG6 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TraipQ8VIG6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TraipQ8VIG6 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.53■□□□□ 0.08
TraipQ8VIG6 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.53■□□□□ 0.08
TraipQ8VIG6 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.53■□□□□ 0.08
TraipQ8VIG6 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.53■□□□□ 0.08
TraipQ8VIG6 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.53■□□□□ 0.08
TraipQ8VIG6 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.53■□□□□ 0.08
TraipQ8VIG6 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Gm7730-201ENSMUST00000212486 454 ntBASIC15.53■□□□□ 0.08
TraipQ8VIG6 Gm46209-201ENSMUST00000217912 553 ntBASIC15.53■□□□□ 0.08
TraipQ8VIG6 Gm9229-201ENSMUST00000222777 126 ntBASIC15.53■□□□□ 0.08
TraipQ8VIG6 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.53■□□□□ 0.08
TraipQ8VIG6 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.53■□□□□ 0.08
TraipQ8VIG6 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TraipQ8VIG6 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TraipQ8VIG6 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TraipQ8VIG6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TraipQ8VIG6 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TraipQ8VIG6 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TraipQ8VIG6 Gm14042-201ENSMUST00000120139 833 ntBASIC15.52■□□□□ 0.08
TraipQ8VIG6 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.52■□□□□ 0.08
TraipQ8VIG6 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TraipQ8VIG6 Gm23547-201ENSMUST00000158210 271 ntBASIC15.52■□□□□ 0.08
TraipQ8VIG6 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TraipQ8VIG6 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TraipQ8VIG6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TraipQ8VIG6 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TraipQ8VIG6 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TraipQ8VIG6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TraipQ8VIG6 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.52■□□□□ 0.08
TraipQ8VIG6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TraipQ8VIG6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TraipQ8VIG6 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TraipQ8VIG6 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TraipQ8VIG6 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TraipQ8VIG6 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms