Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpa1Q8VEE4 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpa1Q8VEE4 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpa1Q8VEE4 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpa1Q8VEE4 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpa1Q8VEE4 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rpa1Q8VEE4 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Rpa1Q8VEE4 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpa1Q8VEE4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.77□□□□□ -0.04
Rpa1Q8VEE4 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpa1Q8VEE4 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpa1Q8VEE4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpa1Q8VEE4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rpa1Q8VEE4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpa1Q8VEE4 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa1Q8VEE4 Gm10499-201ENSMUST00000174094 934 ntBASIC14.77□□□□□ -0.05
Rpa1Q8VEE4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.77□□□□□ -0.05
Rpa1Q8VEE4 Gm19891-201ENSMUST00000189771 303 ntBASIC14.77□□□□□ -0.05
Rpa1Q8VEE4 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.77□□□□□ -0.05
Rpa1Q8VEE4 Gm7506-201ENSMUST00000207758 815 ntBASIC14.77□□□□□ -0.05
Rpa1Q8VEE4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa1Q8VEE4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa1Q8VEE4 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa1Q8VEE4 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.77□□□□□ -0.05
Rpa1Q8VEE4 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa1Q8VEE4 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa1Q8VEE4 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa1Q8VEE4 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa1Q8VEE4 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa1Q8VEE4 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa1Q8VEE4 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa1Q8VEE4 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.05
Rpa1Q8VEE4 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpa1Q8VEE4 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa1Q8VEE4 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa1Q8VEE4 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa1Q8VEE4 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa1Q8VEE4 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa1Q8VEE4 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa1Q8VEE4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rpa1Q8VEE4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa1Q8VEE4 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa1Q8VEE4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa1Q8VEE4 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa1Q8VEE4 Gm15165-201ENSMUST00000118140 502 ntBASIC14.76□□□□□ -0.05
Rpa1Q8VEE4 Gm33142-201ENSMUST00000193913 867 ntBASIC14.76□□□□□ -0.05
Rpa1Q8VEE4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Rpa1Q8VEE4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.76□□□□□ -0.05
Rpa1Q8VEE4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.76□□□□□ -0.05
Rpa1Q8VEE4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa1Q8VEE4 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa1Q8VEE4 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rpa1Q8VEE4 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.76□□□□□ -0.05
Rpa1Q8VEE4 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Olfr129-201ENSMUST00000122318 993 ntBASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rpa1Q8VEE4 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms