Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx39aQ8VDW0 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.24■□□□□ 0.19
Ddx39aQ8VDW0 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.24■□□□□ 0.19
Ddx39aQ8VDW0 Gm5566-201ENSMUST00000116118 459 ntBASIC16.24■□□□□ 0.19
Ddx39aQ8VDW0 Gm8749-201ENSMUST00000117737 331 ntBASIC16.24■□□□□ 0.19
Ddx39aQ8VDW0 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx39aQ8VDW0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Ddx39aQ8VDW0 Gm9063-201ENSMUST00000223299 582 ntBASIC16.24■□□□□ 0.19
Ddx39aQ8VDW0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx39aQ8VDW0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx39aQ8VDW0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx39aQ8VDW0 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.24■□□□□ 0.19
Ddx39aQ8VDW0 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx39aQ8VDW0 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx39aQ8VDW0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.24■□□□□ 0.19
Ddx39aQ8VDW0 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.24■□□□□ 0.19
Ddx39aQ8VDW0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx39aQ8VDW0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx39aQ8VDW0 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx39aQ8VDW0 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx39aQ8VDW0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx39aQ8VDW0 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 Gm27437-201ENSMUST00000183429 107 ntBASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx39aQ8VDW0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Mir1897-201ENSMUST00000122581 272 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Mir7684-201ENSMUST00000183858 60 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gm29310-201ENSMUST00000185468 696 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gm21825-201ENSMUST00000185728 696 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gm29109-201ENSMUST00000185895 696 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gm21896-201ENSMUST00000186520 696 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gm21873-201ENSMUST00000186728 696 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gm21794-201ENSMUST00000187056 696 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gm21880-201ENSMUST00000187275 696 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gm21826-201ENSMUST00000187451 696 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gm21198-201ENSMUST00000188393 696 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gm21749-201ENSMUST00000189343 696 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gm21901-201ENSMUST00000189568 696 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gm29424-201ENSMUST00000189716 696 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gm28599-201ENSMUST00000189838 694 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gm21867-201ENSMUST00000189917 696 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gm29269-201ENSMUST00000190087 696 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gm21722-201ENSMUST00000190153 696 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gm28423-201ENSMUST00000190701 696 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gm21899-201ENSMUST00000190745 696 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gm21910-201ENSMUST00000191163 696 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gm21849-201ENSMUST00000191571 696 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gm28678-201ENSMUST00000191593 696 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gm20910-201ENSMUST00000193268 696 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gm21871-201ENSMUST00000194621 696 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx39aQ8VDW0 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx39aQ8VDW0 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ddx39aQ8VDW0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx39aQ8VDW0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx39aQ8VDW0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms