Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps39Q8R5L3 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.67□□□□□ -0.06
Vps39Q8R5L3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Vps39Q8R5L3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.67□□□□□ -0.06
Vps39Q8R5L3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps39Q8R5L3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.67□□□□□ -0.06
Vps39Q8R5L3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps39Q8R5L3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps39Q8R5L3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.67□□□□□ -0.06
Vps39Q8R5L3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Vps39Q8R5L3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps39Q8R5L3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps39Q8R5L3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.67□□□□□ -0.06
Vps39Q8R5L3 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps39Q8R5L3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps39Q8R5L3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Vps39Q8R5L3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Gm9726-201ENSMUST00000180321 678 ntBASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps39Q8R5L3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Gm8749-201ENSMUST00000117737 331 ntBASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps39Q8R5L3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.64□□□□□ -0.07
Vps39Q8R5L3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms