Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.95□□□□□ -0.5
Nup35Q8R4R6 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Otx2os1-206ENSMUST00000228153 787 ntBASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nup35Q8R4R6 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Gm18489-201ENSMUST00000172565 551 ntBASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nup35Q8R4R6 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Gm6659-201ENSMUST00000174752 547 ntBASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.93□□□□□ -0.5
Nup35Q8R4R6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Cmtm5-203ENSMUST00000227441 610 ntBASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms