Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Cd109Q8R422 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC20.57■□□□□ 0.88
Cd109Q8R422 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Cd109Q8R422 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd109Q8R422 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC20.57■□□□□ 0.88
Cd109Q8R422 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC20.57■□□□□ 0.88
Cd109Q8R422 AC155286.1-201ENSMUST00000218632 448 ntBASIC20.57■□□□□ 0.88
Cd109Q8R422 AC102291.3-201ENSMUST00000226566 405 ntBASIC20.57■□□□□ 0.88
Cd109Q8R422 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd109Q8R422 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd109Q8R422 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Cd109Q8R422 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cd109Q8R422 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd109Q8R422 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC20.57■□□□□ 0.88
Cd109Q8R422 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cd109Q8R422 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd109Q8R422 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cd109Q8R422 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
Cd109Q8R422 Gm11478-201ENSMUST00000117851 599 ntBASIC20.56■□□□□ 0.88
Cd109Q8R422 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cd109Q8R422 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC20.56■□□□□ 0.88
Cd109Q8R422 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC20.56■□□□□ 0.88
Cd109Q8R422 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cd109Q8R422 Gm5354-201ENSMUST00000182417 973 ntBASIC20.56■□□□□ 0.88
Cd109Q8R422 Gm21470-201ENSMUST00000187680 696 ntBASIC20.56■□□□□ 0.88
Cd109Q8R422 Gm43433-201ENSMUST00000196573 481 ntBASIC20.56■□□□□ 0.88
Cd109Q8R422 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC20.56■□□□□ 0.88
Cd109Q8R422 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cd109Q8R422 Carlr-201ENSMUST00000181515 2574 ntBASIC20.56■□□□□ 0.88
Cd109Q8R422 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cd109Q8R422 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cd109Q8R422 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cd109Q8R422 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cd109Q8R422 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cd109Q8R422 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC20.55■□□□□ 0.88
Cd109Q8R422 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cd109Q8R422 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Cd109Q8R422 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC20.55■□□□□ 0.88
Cd109Q8R422 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cd109Q8R422 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cd109Q8R422 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Cd109Q8R422 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC20.55■□□□□ 0.88
Cd109Q8R422 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cd109Q8R422 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cd109Q8R422 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cd109Q8R422 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cd109Q8R422 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Cd109Q8R422 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC20.55■□□□□ 0.88
Cd109Q8R422 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cd109Q8R422 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Cd109Q8R422 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Cd109Q8R422 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cd109Q8R422 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cd109Q8R422 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd109Q8R422 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Cd109Q8R422 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cd109Q8R422 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC20.54■□□□□ 0.88
Cd109Q8R422 Mir6392-201ENSMUST00000184924 108 ntBASIC20.54■□□□□ 0.88
Cd109Q8R422 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC20.54■□□□□ 0.88
Cd109Q8R422 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC20.54■□□□□ 0.88
Cd109Q8R422 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd109Q8R422 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd109Q8R422 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd109Q8R422 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC20.54■□□□□ 0.88
Cd109Q8R422 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Cd109Q8R422 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd109Q8R422 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd109Q8R422 Gm15222-202ENSMUST00000228667 1726 ntBASIC20.54■□□□□ 0.88
Cd109Q8R422 AC166574.6-201ENSMUST00000227889 1806 ntBASIC20.54■□□□□ 0.88
Cd109Q8R422 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd109Q8R422 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd109Q8R422 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd109Q8R422 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cd109Q8R422 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd109Q8R422 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd109Q8R422 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cd109Q8R422 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cd109Q8R422 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cd109Q8R422 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd109Q8R422 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd109Q8R422 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd109Q8R422 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC20.53■□□□□ 0.88
Cd109Q8R422 Gm12341-201ENSMUST00000119724 503 ntBASIC20.53■□□□□ 0.88
Cd109Q8R422 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cd109Q8R422 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC20.53■□□□□ 0.88
Cd109Q8R422 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cd109Q8R422 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd109Q8R422 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd109Q8R422 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Cd109Q8R422 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd109Q8R422 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd109Q8R422 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cd109Q8R422 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd109Q8R422 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd109Q8R422 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd109Q8R422 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd109Q8R422 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd109Q8R422 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC20.53■□□□□ 0.88
Cd109Q8R422 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Cd109Q8R422 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms