Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Gm23984-201ENSMUST00000157139 203 ntBASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Gm8515-201ENSMUST00000194852 576 ntBASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp7Q8R1T1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.64■□□□□ 0.58
Chmp7Q8R1T1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Chmp7Q8R1T1 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp7Q8R1T1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Chmp7Q8R1T1 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp7Q8R1T1 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp7Q8R1T1 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp7Q8R1T1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Chmp7Q8R1T1 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp7Q8R1T1 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Chmp7Q8R1T1 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC18.64■□□□□ 0.57
Chmp7Q8R1T1 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC18.64■□□□□ 0.57
Chmp7Q8R1T1 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC18.64■□□□□ 0.57
Chmp7Q8R1T1 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC18.64■□□□□ 0.57
Chmp7Q8R1T1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp7Q8R1T1 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp7Q8R1T1 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Chmp7Q8R1T1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp7Q8R1T1 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp7Q8R1T1 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp7Q8R1T1 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Chmp7Q8R1T1 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Gm43438-201ENSMUST00000198133 379 ntBASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Gm6180-201ENSMUST00000065243 498 ntBASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 BC001981-202ENSMUST00000191393 1545 ntBASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18.63■□□□□ 0.57
Chmp7Q8R1T1 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 AC123645.1-201ENSMUST00000228469 605 ntBASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp7Q8R1T1 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms