Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC19■□□□□ 0.63
Ddx54Q8K4L0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ddx54Q8K4L0 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx54Q8K4L0 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ddx54Q8K4L0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Ddx54Q8K4L0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx54Q8K4L0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Ddx54Q8K4L0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx54Q8K4L0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ddx54Q8K4L0 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ddx54Q8K4L0 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC19■□□□□ 0.63
Ddx54Q8K4L0 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC19■□□□□ 0.63
Ddx54Q8K4L0 Gm6013-201ENSMUST00000212264 699 ntBASIC19■□□□□ 0.63
Ddx54Q8K4L0 AC154806.6-201ENSMUST00000228192 202 ntBASIC19■□□□□ 0.63
Ddx54Q8K4L0 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx54Q8K4L0 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx54Q8K4L0 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx54Q8K4L0 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx54Q8K4L0 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx54Q8K4L0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ddx54Q8K4L0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx54Q8K4L0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx54Q8K4L0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx54Q8K4L0 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx54Q8K4L0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ddx54Q8K4L0 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx54Q8K4L0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx54Q8K4L0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx54Q8K4L0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx54Q8K4L0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx54Q8K4L0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Ddx54Q8K4L0 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx54Q8K4L0 Gm37466-201ENSMUST00000195692 652 ntBASIC18.99■□□□□ 0.63
Ddx54Q8K4L0 AC154276.1-201ENSMUST00000228874 1299 ntBASIC18.99■□□□□ 0.63
Ddx54Q8K4L0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx54Q8K4L0 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx54Q8K4L0 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx54Q8K4L0 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx54Q8K4L0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx54Q8K4L0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Ddx54Q8K4L0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.99■□□□□ 0.63
Ddx54Q8K4L0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx54Q8K4L0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx54Q8K4L0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx54Q8K4L0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Gm8801-201ENSMUST00000173255 1064 ntBASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Gm9726-201ENSMUST00000180321 678 ntBASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Gm6283-201ENSMUST00000182369 1000 ntBASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx54Q8K4L0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx54Q8K4L0 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Ddx54Q8K4L0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx54Q8K4L0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.97■□□□□ 0.63
Ddx54Q8K4L0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx54Q8K4L0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx54Q8K4L0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx54Q8K4L0 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC18.97■□□□□ 0.63
Ddx54Q8K4L0 Gm15236-201ENSMUST00000117309 379 ntBASIC18.97■□□□□ 0.63
Ddx54Q8K4L0 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Ddx54Q8K4L0 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx54Q8K4L0 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Ddx54Q8K4L0 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx54Q8K4L0 Gm18054-201ENSMUST00000207539 555 ntBASIC18.97■□□□□ 0.63
Ddx54Q8K4L0 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx54Q8K4L0 Gm24526-201ENSMUST00000082921 158 ntBASIC18.97■□□□□ 0.63
Ddx54Q8K4L0 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.97■□□□□ 0.63
Ddx54Q8K4L0 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx54Q8K4L0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx54Q8K4L0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Ddx54Q8K4L0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx54Q8K4L0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx54Q8K4L0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx54Q8K4L0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
Ddx54Q8K4L0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx54Q8K4L0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx54Q8K4L0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms