Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Gm13312-201ENSMUST00000119631 718 ntBASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ebf4Q8K4J2 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Gm10499-201ENSMUST00000174094 934 ntBASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Gm22697-201ENSMUST00000175194 63 ntBASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Gm7977-201ENSMUST00000193787 748 ntBASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ebf4Q8K4J2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.33□□□□□ -0.27
Ebf4Q8K4J2 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ebf4Q8K4J2 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ebf4Q8K4J2 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ebf4Q8K4J2 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ebf4Q8K4J2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ebf4Q8K4J2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms