Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cchcr1Q8K2I2 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cchcr1Q8K2I2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Gm13597-201ENSMUST00000121239 375 ntBASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Gm10154-201ENSMUST00000084445 354 ntBASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cchcr1Q8K2I2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cchcr1Q8K2I2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cchcr1Q8K2I2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cchcr1Q8K2I2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cchcr1Q8K2I2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cchcr1Q8K2I2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC17.29■□□□□ 0.36
Cchcr1Q8K2I2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cchcr1Q8K2I2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Cchcr1Q8K2I2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cchcr1Q8K2I2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cchcr1Q8K2I2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cchcr1Q8K2I2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.29■□□□□ 0.36
Cchcr1Q8K2I2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cchcr1Q8K2I2 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Cchcr1Q8K2I2 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cchcr1Q8K2I2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cchcr1Q8K2I2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cchcr1Q8K2I2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Cchcr1Q8K2I2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cchcr1Q8K2I2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.29■□□□□ 0.36
Cchcr1Q8K2I2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.29■□□□□ 0.36
Cchcr1Q8K2I2 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.29■□□□□ 0.36
Cchcr1Q8K2I2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms