Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Gm45612-201ENSMUST00000211320 160 ntBASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rfwd3Q8CIK8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Gm37935-201ENSMUST00000192012 982 ntBASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Gm2213-201ENSMUST00000197485 688 ntBASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rfwd3Q8CIK8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Gm2756-201ENSMUST00000195851 400 ntBASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Gm20553-201ENSMUST00000204205 844 ntBASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rfwd3Q8CIK8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms