Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clip4Q8CI96 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clip4Q8CI96 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clip4Q8CI96 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clip4Q8CI96 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.78□□□□□ -0.04
Clip4Q8CI96 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clip4Q8CI96 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.77□□□□□ -0.04
Clip4Q8CI96 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clip4Q8CI96 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clip4Q8CI96 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clip4Q8CI96 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clip4Q8CI96 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Clip4Q8CI96 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.77□□□□□ -0.04
Clip4Q8CI96 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clip4Q8CI96 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clip4Q8CI96 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Clip4Q8CI96 Gm2213-201ENSMUST00000197485 688 ntBASIC14.77□□□□□ -0.05
Clip4Q8CI96 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.77□□□□□ -0.05
Clip4Q8CI96 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Clip4Q8CI96 Gm18246-201ENSMUST00000221023 728 ntBASIC14.77□□□□□ -0.05
Clip4Q8CI96 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clip4Q8CI96 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clip4Q8CI96 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clip4Q8CI96 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clip4Q8CI96 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clip4Q8CI96 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.77□□□□□ -0.05
Clip4Q8CI96 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clip4Q8CI96 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clip4Q8CI96 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clip4Q8CI96 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clip4Q8CI96 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.77□□□□□ -0.05
Clip4Q8CI96 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Clip4Q8CI96 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clip4Q8CI96 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.77□□□□□ -0.05
Clip4Q8CI96 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clip4Q8CI96 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Clip4Q8CI96 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clip4Q8CI96 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Clip4Q8CI96 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clip4Q8CI96 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.76□□□□□ -0.05
Clip4Q8CI96 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clip4Q8CI96 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Clip4Q8CI96 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clip4Q8CI96 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clip4Q8CI96 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Clip4Q8CI96 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.76□□□□□ -0.05
Clip4Q8CI96 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clip4Q8CI96 Gm13597-201ENSMUST00000121239 375 ntBASIC14.76□□□□□ -0.05
Clip4Q8CI96 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.76□□□□□ -0.05
Clip4Q8CI96 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Clip4Q8CI96 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Clip4Q8CI96 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.76□□□□□ -0.05
Clip4Q8CI96 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clip4Q8CI96 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clip4Q8CI96 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Clip4Q8CI96 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clip4Q8CI96 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clip4Q8CI96 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clip4Q8CI96 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clip4Q8CI96 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Clip4Q8CI96 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Clip4Q8CI96 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Clip4Q8CI96 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clip4Q8CI96 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clip4Q8CI96 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Clip4Q8CI96 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clip4Q8CI96 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clip4Q8CI96 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Clip4Q8CI96 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clip4Q8CI96 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.75□□□□□ -0.05
Clip4Q8CI96 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Clip4Q8CI96 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.75□□□□□ -0.05
Clip4Q8CI96 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.75□□□□□ -0.05
Clip4Q8CI96 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.75□□□□□ -0.05
Clip4Q8CI96 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Clip4Q8CI96 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
Clip4Q8CI96 Gm10499-201ENSMUST00000174094 934 ntBASIC14.75□□□□□ -0.05
Clip4Q8CI96 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.75□□□□□ -0.05
Clip4Q8CI96 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.75□□□□□ -0.05
Clip4Q8CI96 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clip4Q8CI96 Gm10175-201ENSMUST00000086013 645 ntBASIC14.75□□□□□ -0.05
Clip4Q8CI96 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clip4Q8CI96 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clip4Q8CI96 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clip4Q8CI96 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Clip4Q8CI96 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clip4Q8CI96 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.75□□□□□ -0.05
Clip4Q8CI96 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clip4Q8CI96 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clip4Q8CI96 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
Clip4Q8CI96 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clip4Q8CI96 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clip4Q8CI96 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clip4Q8CI96 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clip4Q8CI96 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clip4Q8CI96 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clip4Q8CI96 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clip4Q8CI96 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clip4Q8CI96 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clip4Q8CI96 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms