Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim52Q8CDV4 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim52Q8CDV4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim52Q8CDV4 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim52Q8CDV4 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
Trim52Q8CDV4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim52Q8CDV4 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.97■□□□□ 0.47
Trim52Q8CDV4 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.97■□□□□ 0.47
Trim52Q8CDV4 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.97■□□□□ 0.47
Trim52Q8CDV4 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC17.97■□□□□ 0.47
Trim52Q8CDV4 Gm28760-201ENSMUST00000185995 736 ntBASIC17.97■□□□□ 0.47
Trim52Q8CDV4 Gm28631-201ENSMUST00000190740 334 ntBASIC17.97■□□□□ 0.47
Trim52Q8CDV4 Gm31326-201ENSMUST00000191856 1048 ntBASIC17.97■□□□□ 0.47
Trim52Q8CDV4 AC153872.1-201ENSMUST00000199539 128 ntBASIC17.97■□□□□ 0.47
Trim52Q8CDV4 Gm45668-201ENSMUST00000211271 493 ntBASIC17.97■□□□□ 0.47
Trim52Q8CDV4 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC17.97■□□□□ 0.47
Trim52Q8CDV4 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim52Q8CDV4 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trim52Q8CDV4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
Trim52Q8CDV4 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim52Q8CDV4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim52Q8CDV4 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim52Q8CDV4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim52Q8CDV4 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim52Q8CDV4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Trim52Q8CDV4 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Trim52Q8CDV4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim52Q8CDV4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim52Q8CDV4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim52Q8CDV4 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim52Q8CDV4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim52Q8CDV4 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim52Q8CDV4 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim52Q8CDV4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trim52Q8CDV4 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17.96■□□□□ 0.47
Trim52Q8CDV4 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trim52Q8CDV4 AC154846.1-201ENSMUST00000226278 862 ntBASIC17.96■□□□□ 0.47
Trim52Q8CDV4 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim52Q8CDV4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.96■□□□□ 0.47
Trim52Q8CDV4 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trim52Q8CDV4 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim52Q8CDV4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Trim52Q8CDV4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim52Q8CDV4 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trim52Q8CDV4 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim52Q8CDV4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim52Q8CDV4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trim52Q8CDV4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim52Q8CDV4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim52Q8CDV4 Carlr-201ENSMUST00000181515 2574 ntBASIC17.95■□□□□ 0.46
Trim52Q8CDV4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim52Q8CDV4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim52Q8CDV4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim52Q8CDV4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim52Q8CDV4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim52Q8CDV4 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim52Q8CDV4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim52Q8CDV4 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim52Q8CDV4 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC17.95■□□□□ 0.46
Trim52Q8CDV4 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim52Q8CDV4 Gm6912-201ENSMUST00000117218 544 ntBASIC17.95■□□□□ 0.46
Trim52Q8CDV4 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim52Q8CDV4 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim52Q8CDV4 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim52Q8CDV4 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trim52Q8CDV4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim52Q8CDV4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim52Q8CDV4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.95■□□□□ 0.46
Trim52Q8CDV4 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim52Q8CDV4 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trim52Q8CDV4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim52Q8CDV4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trim52Q8CDV4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim52Q8CDV4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim52Q8CDV4 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim52Q8CDV4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim52Q8CDV4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim52Q8CDV4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Trim52Q8CDV4 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC17.94■□□□□ 0.46
Trim52Q8CDV4 Gm23984-201ENSMUST00000157139 203 ntBASIC17.94■□□□□ 0.46
Trim52Q8CDV4 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC17.94■□□□□ 0.46
Trim52Q8CDV4 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trim52Q8CDV4 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trim52Q8CDV4 Gm8515-201ENSMUST00000194852 576 ntBASIC17.94■□□□□ 0.46
Trim52Q8CDV4 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.94■□□□□ 0.46
Trim52Q8CDV4 AC165157.4-201ENSMUST00000220587 139 ntBASIC17.94■□□□□ 0.46
Trim52Q8CDV4 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim52Q8CDV4 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim52Q8CDV4 Gm15823-201ENSMUST00000064305 670 ntBASIC17.94■□□□□ 0.46
Trim52Q8CDV4 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim52Q8CDV4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim52Q8CDV4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim52Q8CDV4 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim52Q8CDV4 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim52Q8CDV4 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim52Q8CDV4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim52Q8CDV4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Trim52Q8CDV4 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim52Q8CDV4 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim52Q8CDV4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms