Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Gm15198-201ENSMUST00000117283 177 ntBASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Gm13226-201ENSMUST00000117838 404 ntBASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Trav4d-2-201ENSMUST00000120914 335 ntBASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Gm17420-201ENSMUST00000164753 153 ntBASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 AC159896.2-201ENSMUST00000214753 269 ntBASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 AC154319.1-201ENSMUST00000216330 312 ntBASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 AL589735.1-201ENSMUST00000224353 270 ntBASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
Rtp1Q8C8C1 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 AC154171.1-201ENSMUST00000224610 643 ntBASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp1Q8C8C1 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rtp1Q8C8C1 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Rtp1Q8C8C1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rtp1Q8C8C1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.58■□□□□ 0.25
Rtp1Q8C8C1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rtp1Q8C8C1 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC16.58■□□□□ 0.24
Rtp1Q8C8C1 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Rtp1Q8C8C1 Gm6244-201ENSMUST00000178732 841 ntBASIC16.58■□□□□ 0.24
Rtp1Q8C8C1 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.58■□□□□ 0.24
Rtp1Q8C8C1 Mir7654-201ENSMUST00000185082 70 ntBASIC16.58■□□□□ 0.24
Rtp1Q8C8C1 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rtp1Q8C8C1 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC16.58■□□□□ 0.24
Rtp1Q8C8C1 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.58■□□□□ 0.24
Rtp1Q8C8C1 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rtp1Q8C8C1 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rtp1Q8C8C1 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rtp1Q8C8C1 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rtp1Q8C8C1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rtp1Q8C8C1 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rtp1Q8C8C1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Rtp1Q8C8C1 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rtp1Q8C8C1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Rtp1Q8C8C1 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.58■□□□□ 0.24
Rtp1Q8C8C1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Rtp1Q8C8C1 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.57■□□□□ 0.24
Rtp1Q8C8C1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtp1Q8C8C1 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rtp1Q8C8C1 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.57■□□□□ 0.24
Rtp1Q8C8C1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtp1Q8C8C1 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rtp1Q8C8C1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Rtp1Q8C8C1 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtp1Q8C8C1 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtp1Q8C8C1 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtp1Q8C8C1 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC16.57■□□□□ 0.24
Rtp1Q8C8C1 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rtp1Q8C8C1 Gm12585-201ENSMUST00000117307 290 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms