Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Gm7222-201ENSMUST00000117512 906 ntBASIC13.08□□□□□ -0.32
Rft1Q8C3B8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Gm6550-201ENSMUST00000187574 993 ntBASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Gm19164-201ENSMUST00000210667 640 ntBASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Gm27646-201ENSMUST00000183989 110 ntBASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Gm6443-201ENSMUST00000203599 874 ntBASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rft1Q8C3B8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Gm12350-201ENSMUST00000121208 462 ntBASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 AV026068-213ENSMUST00000223675 1171 ntBASIC13.06□□□□□ -0.32
Rft1Q8C3B8 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rft1Q8C3B8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms