Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Gm5866-201ENSMUST00000177881 973 ntBASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sh3rf2Q8BZT2 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Mir1897-201ENSMUST00000122581 272 ntBASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.81□□□□□ -0.04
Sh3rf2Q8BZT2 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Gm15487-201ENSMUST00000122373 465 ntBASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf2Q8BZT2 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf2Q8BZT2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms