Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk5rap1Q8BTW8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Gm27618-201ENSMUST00000183671 60 ntBASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap1Q8BTW8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cdk5rap1Q8BTW8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.19
Cdk5rap1Q8BTW8 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cdk5rap1Q8BTW8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap1Q8BTW8 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap1Q8BTW8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cdk5rap1Q8BTW8 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Cdk5rap1Q8BTW8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cdk5rap1Q8BTW8 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap1Q8BTW8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap1Q8BTW8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap1Q8BTW8 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.89□□□□□ -0.19
Cdk5rap1Q8BTW8 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.89□□□□□ -0.19
Cdk5rap1Q8BTW8 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap1Q8BTW8 Gm9726-201ENSMUST00000180321 678 ntBASIC13.89□□□□□ -0.19
Cdk5rap1Q8BTW8 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap1Q8BTW8 Gm28630-201ENSMUST00000187806 498 ntBASIC13.89□□□□□ -0.19
Cdk5rap1Q8BTW8 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.89□□□□□ -0.19
Cdk5rap1Q8BTW8 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap1Q8BTW8 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap1Q8BTW8 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap1Q8BTW8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap1Q8BTW8 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap1Q8BTW8 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap1Q8BTW8 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap1Q8BTW8 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Gm13823-201ENSMUST00000119930 345 ntBASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Olfr286-202ENSMUST00000205305 969 ntBASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk5rap1Q8BTW8 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk5rap1Q8BTW8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms