Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cpsf4Q8BQZ5 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Gm12134-201ENSMUST00000122109 520 ntBASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Mir8117-201ENSMUST00000184773 107 ntBASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Gm5867-201ENSMUST00000063197 592 ntBASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpsf4Q8BQZ5 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
Cpsf4Q8BQZ5 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.21□□□□□ -0.14
Cpsf4Q8BQZ5 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cpsf4Q8BQZ5 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.21□□□□□ -0.14
Cpsf4Q8BQZ5 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cpsf4Q8BQZ5 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cpsf4Q8BQZ5 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Cpsf4Q8BQZ5 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cpsf4Q8BQZ5 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Cpsf4Q8BQZ5 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Gm5177-201ENSMUST00000183092 997 ntBASIC14.19□□□□□ -0.14
Cpsf4Q8BQZ5 Gm44492-201ENSMUST00000197012 141 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms