Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col16a1Q8BLX7 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Col16a1Q8BLX7 Gm15429-201ENSMUST00000151268 798 ntBASIC18.89■□□□□ 0.62
Col16a1Q8BLX7 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Col16a1Q8BLX7 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Col16a1Q8BLX7 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.62
Col16a1Q8BLX7 Gm6091-201ENSMUST00000098307 165 ntBASIC18.89■□□□□ 0.62
Col16a1Q8BLX7 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Col16a1Q8BLX7 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Col16a1Q8BLX7 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Col16a1Q8BLX7 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col16a1Q8BLX7 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col16a1Q8BLX7 Gm14451-201ENSMUST00000121581 1542 ntBASIC18.89■□□□□ 0.61
Col16a1Q8BLX7 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col16a1Q8BLX7 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col16a1Q8BLX7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col16a1Q8BLX7 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col16a1Q8BLX7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.89■□□□□ 0.61
Col16a1Q8BLX7 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col16a1Q8BLX7 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col16a1Q8BLX7 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col16a1Q8BLX7 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col16a1Q8BLX7 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col16a1Q8BLX7 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Col16a1Q8BLX7 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col16a1Q8BLX7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col16a1Q8BLX7 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col16a1Q8BLX7 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col16a1Q8BLX7 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col16a1Q8BLX7 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col16a1Q8BLX7 Gm11661-201ENSMUST00000121761 1327 ntBASIC18.88■□□□□ 0.61
Col16a1Q8BLX7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col16a1Q8BLX7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.88■□□□□ 0.61
Col16a1Q8BLX7 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col16a1Q8BLX7 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col16a1Q8BLX7 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC18.88■□□□□ 0.61
Col16a1Q8BLX7 Gm27731-201ENSMUST00000185192 107 ntBASIC18.88■□□□□ 0.61
Col16a1Q8BLX7 AC139350.3-201ENSMUST00000226151 420 ntBASIC18.88■□□□□ 0.61
Col16a1Q8BLX7 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col16a1Q8BLX7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col16a1Q8BLX7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col16a1Q8BLX7 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.88■□□□□ 0.61
Col16a1Q8BLX7 Gm42632-201ENSMUST00000201707 2411 ntBASIC18.88■□□□□ 0.61
Col16a1Q8BLX7 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col16a1Q8BLX7 Zscan30-202ENSMUST00000224144 1458 ntBASIC18.87■□□□□ 0.61
Col16a1Q8BLX7 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col16a1Q8BLX7 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col16a1Q8BLX7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col16a1Q8BLX7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col16a1Q8BLX7 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col16a1Q8BLX7 Gm26464-201ENSMUST00000157094 305 ntBASIC18.87■□□□□ 0.61
Col16a1Q8BLX7 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col16a1Q8BLX7 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC18.87■□□□□ 0.61
Col16a1Q8BLX7 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC18.87■□□□□ 0.61
Col16a1Q8BLX7 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col16a1Q8BLX7 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col16a1Q8BLX7 Carlr-201ENSMUST00000181515 2574 ntBASIC18.87■□□□□ 0.61
Col16a1Q8BLX7 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col16a1Q8BLX7 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Col16a1Q8BLX7 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col16a1Q8BLX7 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col16a1Q8BLX7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Col16a1Q8BLX7 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Gm11524-201ENSMUST00000119349 807 ntBASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Gm43179-201ENSMUST00000198797 275 ntBASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Ssr1-204ENSMUST00000225319 1610 ntBASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.86■□□□□ 0.61
Col16a1Q8BLX7 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col16a1Q8BLX7 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col16a1Q8BLX7 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC18.85■□□□□ 0.61
Col16a1Q8BLX7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Col16a1Q8BLX7 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC18.85■□□□□ 0.61
Col16a1Q8BLX7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col16a1Q8BLX7 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col16a1Q8BLX7 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Col16a1Q8BLX7 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms