Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smg1Q8BKX6 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smg1Q8BKX6 Gm26083-201ENSMUST00000157904 193 ntBASIC12.17□□□□□ -0.46
Smg1Q8BKX6 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Smg1Q8BKX6 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smg1Q8BKX6 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.17□□□□□ -0.46
Smg1Q8BKX6 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smg1Q8BKX6 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smg1Q8BKX6 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smg1Q8BKX6 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.17□□□□□ -0.46
Smg1Q8BKX6 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smg1Q8BKX6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smg1Q8BKX6 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
Smg1Q8BKX6 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.17□□□□□ -0.46
Smg1Q8BKX6 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smg1Q8BKX6 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.17□□□□□ -0.46
Smg1Q8BKX6 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.17□□□□□ -0.46
Smg1Q8BKX6 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smg1Q8BKX6 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smg1Q8BKX6 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.17□□□□□ -0.46
Smg1Q8BKX6 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.17□□□□□ -0.46
Smg1Q8BKX6 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.16□□□□□ -0.46
Smg1Q8BKX6 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Gm37986-201ENSMUST00000193285 383 ntBASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Gm43138-201ENSMUST00000199123 708 ntBASIC12.16□□□□□ -0.46
Smg1Q8BKX6 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Gm5479-201ENSMUST00000160578 435 ntBASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Gm24514-201ENSMUST00000174961 285 ntBASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Smg1Q8BKX6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Gm45880-201ENSMUST00000213041 853 ntBASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Smg1Q8BKX6 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Smg1Q8BKX6 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Smg1Q8BKX6 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.47
Smg1Q8BKX6 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Smg1Q8BKX6 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Smg1Q8BKX6 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Smg1Q8BKX6 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.15□□□□□ -0.47
Smg1Q8BKX6 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Smg1Q8BKX6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Smg1Q8BKX6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Smg1Q8BKX6 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms