Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm7787-201ENSMUST00000216858 688 ntBASIC15.02■□□□□ -0
Chmp2bQ8BJF9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp2bQ8BJF9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.02■□□□□ -0
Chmp2bQ8BJF9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.02■□□□□ -0
Chmp2bQ8BJF9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp2bQ8BJF9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Chmp2bQ8BJF9 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp2bQ8BJF9 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp2bQ8BJF9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp2bQ8BJF9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp2bQ8BJF9 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp2bQ8BJF9 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp2bQ8BJF9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp2bQ8BJF9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp2bQ8BJF9 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp2bQ8BJF9 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.02□□□□□ -0.01
Chmp2bQ8BJF9 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp2bQ8BJF9 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Birc2-201ENSMUST00000054878 378 ntBASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
Chmp2bQ8BJF9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Gm45167-201ENSMUST00000208007 322 ntBASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Gm6376-201ENSMUST00000209407 580 ntBASIC15□□□□□ -0.01
Chmp2bQ8BJF9 CT010506.4-201ENSMUST00000225457 351 ntBASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Chmp2bQ8BJF9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp2bQ8BJF9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms