Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
Clrn3Q8BHH8 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Clrn3Q8BHH8 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Clrn3Q8BHH8 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Clrn3Q8BHH8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Clrn3Q8BHH8 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Gm18206-201ENSMUST00000207027 926 ntBASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Gm5364-201ENSMUST00000216789 889 ntBASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Efs-202ENSMUST00000227037 2540 ntBASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn3Q8BHH8 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Gm6443-201ENSMUST00000203599 874 ntBASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn3Q8BHH8 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Mir8117-201ENSMUST00000184773 107 ntBASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms