Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc5a7Q8BGY9 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc5a7Q8BGY9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Slc5a7Q8BGY9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.82□□□□□ -0.36
Slc5a7Q8BGY9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Slc5a7Q8BGY9 Gm45328-201ENSMUST00000210942 917 ntBASIC12.82□□□□□ -0.36
Slc5a7Q8BGY9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc5a7Q8BGY9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc5a7Q8BGY9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc5a7Q8BGY9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Slc5a7Q8BGY9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc5a7Q8BGY9 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Slc5a7Q8BGY9 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc5a7Q8BGY9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc5a7Q8BGY9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Slc5a7Q8BGY9 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc5a7Q8BGY9 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Slc5a7Q8BGY9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc5a7Q8BGY9 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Slc5a7Q8BGY9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc5a7Q8BGY9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Gm6345-202ENSMUST00000180900 204 ntBASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc5a7Q8BGY9 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Gm10013-201ENSMUST00000106074 672 ntBASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Gm4459-201ENSMUST00000118750 468 ntBASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Gm25745-201ENSMUST00000174945 133 ntBASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Mir3081-201ENSMUST00000175305 84 ntBASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc5a7Q8BGY9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms