Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Samm50Q8BGH2 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.19■□□□□ 0.34
Samm50Q8BGH2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Samm50Q8BGH2 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 Gm37935-201ENSMUST00000192012 982 ntBASIC17.18■□□□□ 0.34
Samm50Q8BGH2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Samm50Q8BGH2 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Samm50Q8BGH2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC17.17■□□□□ 0.34
Samm50Q8BGH2 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Samm50Q8BGH2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Samm50Q8BGH2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Samm50Q8BGH2 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Samm50Q8BGH2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Samm50Q8BGH2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Samm50Q8BGH2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Samm50Q8BGH2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Samm50Q8BGH2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Samm50Q8BGH2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Samm50Q8BGH2 Gm10499-201ENSMUST00000174094 934 ntBASIC17.17■□□□□ 0.34
Samm50Q8BGH2 Mir3113-201ENSMUST00000175478 76 ntBASIC17.17■□□□□ 0.34
Samm50Q8BGH2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.17■□□□□ 0.34
Samm50Q8BGH2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.17■□□□□ 0.34
Samm50Q8BGH2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.17■□□□□ 0.34
Samm50Q8BGH2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Samm50Q8BGH2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Samm50Q8BGH2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Samm50Q8BGH2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Samm50Q8BGH2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Samm50Q8BGH2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Samm50Q8BGH2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Samm50Q8BGH2 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Samm50Q8BGH2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Samm50Q8BGH2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Samm50Q8BGH2 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.16■□□□□ 0.34
Samm50Q8BGH2 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Samm50Q8BGH2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Samm50Q8BGH2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Samm50Q8BGH2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Samm50Q8BGH2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Samm50Q8BGH2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.16■□□□□ 0.34
Samm50Q8BGH2 Mir8117-201ENSMUST00000184773 107 ntBASIC17.16■□□□□ 0.34
Samm50Q8BGH2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Samm50Q8BGH2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Samm50Q8BGH2 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.16■□□□□ 0.34
Samm50Q8BGH2 Gm18246-201ENSMUST00000221023 728 ntBASIC17.16■□□□□ 0.34
Samm50Q8BGH2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Samm50Q8BGH2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Samm50Q8BGH2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Samm50Q8BGH2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Samm50Q8BGH2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Samm50Q8BGH2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Samm50Q8BGH2 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Samm50Q8BGH2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Samm50Q8BGH2 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Samm50Q8BGH2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Samm50Q8BGH2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Samm50Q8BGH2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Samm50Q8BGH2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Samm50Q8BGH2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Samm50Q8BGH2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Samm50Q8BGH2 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Samm50Q8BGH2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Samm50Q8BGH2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Samm50Q8BGH2 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Samm50Q8BGH2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Samm50Q8BGH2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Samm50Q8BGH2 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Samm50Q8BGH2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Samm50Q8BGH2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.15■□□□□ 0.34
Samm50Q8BGH2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Samm50Q8BGH2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Samm50Q8BGH2 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.15■□□□□ 0.34
Samm50Q8BGH2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.15■□□□□ 0.34
Samm50Q8BGH2 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.15■□□□□ 0.34
Samm50Q8BGH2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.15■□□□□ 0.34
Samm50Q8BGH2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms