Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubp1Q811S7 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubp1Q811S7 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubp1Q811S7 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ubp1Q811S7 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Ubp1Q811S7 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubp1Q811S7 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.45□□□□□ -0.1
Ubp1Q811S7 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.45□□□□□ -0.1
Ubp1Q811S7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubp1Q811S7 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubp1Q811S7 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubp1Q811S7 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ubp1Q811S7 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubp1Q811S7 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ubp1Q811S7 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubp1Q811S7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubp1Q811S7 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ubp1Q811S7 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.44□□□□□ -0.1
Ubp1Q811S7 Gm11745-201ENSMUST00000121669 448 ntBASIC14.44□□□□□ -0.1
Ubp1Q811S7 Gm6736-201ENSMUST00000166583 948 ntBASIC14.44□□□□□ -0.1
Ubp1Q811S7 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubp1Q811S7 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ubp1Q811S7 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.44□□□□□ -0.1
Ubp1Q811S7 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubp1Q811S7 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubp1Q811S7 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubp1Q811S7 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubp1Q811S7 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ubp1Q811S7 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubp1Q811S7 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ubp1Q811S7 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubp1Q811S7 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubp1Q811S7 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubp1Q811S7 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.44□□□□□ -0.1
Ubp1Q811S7 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubp1Q811S7 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubp1Q811S7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubp1Q811S7 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubp1Q811S7 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubp1Q811S7 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ubp1Q811S7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ubp1Q811S7 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubp1Q811S7 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ubp1Q811S7 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubp1Q811S7 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubp1Q811S7 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.43□□□□□ -0.1
Ubp1Q811S7 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.43□□□□□ -0.1
Ubp1Q811S7 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ubp1Q811S7 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.43□□□□□ -0.1
Ubp1Q811S7 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.43□□□□□ -0.1
Ubp1Q811S7 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ubp1Q811S7 Gm2756-201ENSMUST00000195851 400 ntBASIC14.43□□□□□ -0.1
Ubp1Q811S7 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.43□□□□□ -0.1
Ubp1Q811S7 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.43□□□□□ -0.1
Ubp1Q811S7 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubp1Q811S7 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubp1Q811S7 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubp1Q811S7 Carlr-201ENSMUST00000181515 2574 ntBASIC14.43□□□□□ -0.1
Ubp1Q811S7 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubp1Q811S7 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubp1Q811S7 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ubp1Q811S7 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubp1Q811S7 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ubp1Q811S7 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ubp1Q811S7 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ubp1Q811S7 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.42□□□□□ -0.1
Ubp1Q811S7 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Gm27494-201ENSMUST00000184735 189 ntBASIC14.42□□□□□ -0.1
Ubp1Q811S7 Gm43575-201ENSMUST00000196420 516 ntBASIC14.42□□□□□ -0.1
Ubp1Q811S7 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Gm45612-201ENSMUST00000211320 160 ntBASIC14.42□□□□□ -0.1
Ubp1Q811S7 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ubp1Q811S7 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms