Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim50Q810I2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trim50Q810I2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim50Q810I2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim50Q810I2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim50Q810I2 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim50Q810I2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim50Q810I2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim50Q810I2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim50Q810I2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim50Q810I2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim50Q810I2 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim50Q810I2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim50Q810I2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim50Q810I2 Gm4995-201ENSMUST00000117247 432 ntBASIC14.25□□□□□ -0.13
Trim50Q810I2 Gm8749-201ENSMUST00000117737 331 ntBASIC14.25□□□□□ -0.13
Trim50Q810I2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim50Q810I2 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim50Q810I2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim50Q810I2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.25□□□□□ -0.13
Trim50Q810I2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim50Q810I2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim50Q810I2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim50Q810I2 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim50Q810I2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim50Q810I2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim50Q810I2 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim50Q810I2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Trim50Q810I2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim50Q810I2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim50Q810I2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim50Q810I2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim50Q810I2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim50Q810I2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Trim50Q810I2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim50Q810I2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim50Q810I2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim50Q810I2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim50Q810I2 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Trim50Q810I2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim50Q810I2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim50Q810I2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim50Q810I2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim50Q810I2 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.24□□□□□ -0.13
Trim50Q810I2 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.24□□□□□ -0.13
Trim50Q810I2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim50Q810I2 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim50Q810I2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim50Q810I2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim50Q810I2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim50Q810I2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim50Q810I2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim50Q810I2 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.24□□□□□ -0.13
Trim50Q810I2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim50Q810I2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim50Q810I2 Gm20553-201ENSMUST00000204205 844 ntBASIC14.24□□□□□ -0.13
Trim50Q810I2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim50Q810I2 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim50Q810I2 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim50Q810I2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim50Q810I2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim50Q810I2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim50Q810I2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim50Q810I2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim50Q810I2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim50Q810I2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.24□□□□□ -0.13
Trim50Q810I2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim50Q810I2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim50Q810I2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim50Q810I2 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim50Q810I2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim50Q810I2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim50Q810I2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim50Q810I2 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim50Q810I2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim50Q810I2 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim50Q810I2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim50Q810I2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim50Q810I2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim50Q810I2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim50Q810I2 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim50Q810I2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim50Q810I2 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.23□□□□□ -0.13
Trim50Q810I2 Gm25911-201ENSMUST00000157621 56 ntBASIC14.23□□□□□ -0.13
Trim50Q810I2 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.23□□□□□ -0.13
Trim50Q810I2 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.23□□□□□ -0.13
Trim50Q810I2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim50Q810I2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim50Q810I2 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim50Q810I2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trim50Q810I2 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim50Q810I2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trim50Q810I2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim50Q810I2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim50Q810I2 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim50Q810I2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim50Q810I2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim50Q810I2 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim50Q810I2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim50Q810I2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms