Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trnp1Q80ZI1 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trnp1Q80ZI1 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trnp1Q80ZI1 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trnp1Q80ZI1 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Trnp1Q80ZI1 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.36■□□□□ 0.21
Trnp1Q80ZI1 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.36■□□□□ 0.21
Trnp1Q80ZI1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trnp1Q80ZI1 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.36■□□□□ 0.21
Trnp1Q80ZI1 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trnp1Q80ZI1 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trnp1Q80ZI1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trnp1Q80ZI1 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Gm15198-201ENSMUST00000117283 177 ntBASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Gm15957-201ENSMUST00000118893 974 ntBASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Gm7287-201ENSMUST00000205267 602 ntBASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Gm7561-201ENSMUST00000211203 886 ntBASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 AC159896.2-201ENSMUST00000214753 269 ntBASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 AC154319.1-201ENSMUST00000216330 312 ntBASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 AL589735.1-201ENSMUST00000224353 270 ntBASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trnp1Q80ZI1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Gm15240-201ENSMUST00000118156 720 ntBASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Gm27731-201ENSMUST00000185192 107 ntBASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 AC154171.1-201ENSMUST00000224610 643 ntBASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Zscan30-202ENSMUST00000224144 1458 ntBASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.34■□□□□ 0.21
Trnp1Q80ZI1 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trnp1Q80ZI1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trnp1Q80ZI1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trnp1Q80ZI1 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Trnp1Q80ZI1 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trnp1Q80ZI1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trnp1Q80ZI1 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC16.33■□□□□ 0.2
Trnp1Q80ZI1 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Trnp1Q80ZI1 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.33■□□□□ 0.2
Trnp1Q80ZI1 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trnp1Q80ZI1 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trnp1Q80ZI1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trnp1Q80ZI1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trnp1Q80ZI1 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trnp1Q80ZI1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trnp1Q80ZI1 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trnp1Q80ZI1 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trnp1Q80ZI1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trnp1Q80ZI1 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trnp1Q80ZI1 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trnp1Q80ZI1 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms